Molecular Evolution of Interferon-Epsilon (IFNε) Pseudogene Modulates Innate and Specific Antiviral Immunity in Manis javanica

Table 1

Predictions of the ratio of synonymous () and nonsynonymous () substitutions at each site, as well as / ratio values for each node in the tree.

Node#	/ Branch1	Branch1	Branch1	/ Branch2	Branch2	Branch2
1	6.0791	0.00608	1.00E-10	0	0	0.00497
2	0.2955	0.00565	0.01913	0.7126	0.02089	0.02932
5	0.4529	0.00413	0.00911	0.3974	0.00718	0.01808
6	0.9263	0.01861	0.02009	0.4947	0.00748	0.01512
7	0.5271	0.03621	0.06869	0.4298	0.05502	0.128
8	0.8922	0.05931	0.06648	0.5265	0.01203	0.02284
9	1.2555	0.00626	0.00498	1.0942	0.01087	0.00993
10	0.3282	0.00994	0.03029	0.9819	0.02744	0.02795
11	0.4331	0.03787	0.08745	0.4108	0.01092	0.02658
12	0.4784	0.02808	0.05871	1.0821	0.04247	0.03925
13	0.4424	0.04602	0.104	0.5056	0.0571	0.1129
14	0.1588	0.00201	0.01264	5.6418	0.00564
15	2.0182	0.00202		2.809	0.00281
16	0.5466	0.03439	0.06292	0.7116	0.06419	0.09021
17	0.3683	0.02195	0.05961	0.4945	0.01996	0.04036
18	1.1143	0.1852	0.1662	1.06	0.75	0.7075
19	0.7832	0.08101	0.1034	0.8244	0.167	0.2026
20	0.8417	0.1369	0.1626	1.0398	0.1376	0.1323
21	0.8476	0.4461	0.5263	1.0063	0.4104	0.4078
22	0.6054	0.1454	0.2402	0.8504	0.299	0.3516
23	0.7574	0.4534	0.5986	1.4368	0.3565	0.2482
24	0.8288	0.1404	0.1694	1.0027	0.4484	0.4472
25	2.7029	0.0027	0.00084	2.8373	0.01347	0.00475
26	2.7029	0.0027	0.00042	4.5788	0.00458	0.00063
27	2.0615	0.00206		0	0
28	0.6488	0.01851	0.02853	1.5919	0.02479	0.01557
29	1.1378	0.04676	0.0411	0.8815	0.04524	0.05132
30	1.0504	0.00495	0.00471	0.745	0.00351	0.00471
32	0.3885	0.04416	0.1137	1.3015	0.01844	0.01417
33	0.5427	0.01059	0.01952	0.2371	0.00459	0.01937
34	0.6905	0.02384	0.03452	0.7567	0.04153	0.05488
35	1.1026	0.1757	0.1594	0.685	0.3093	0.4515
36	0.8901	0.1004	0.1128	0.4841	0.1047	0.2162
37	1.1455	0.163	0.1423	0.9727	0.0626	0.06435
38	0.331	0.0092	0.02778	6.1696	0.01541	0.0025
39	0.3365	0.01879	0.05585	0.5018	0.03632	0.07238
40	0.6912	0.01728	0.025	0.136	0.00461	0.03385
41	0.763	0.02883	0.03778	0.5163	0.06593	0.1277
42	0.8015	0.09723	0.1213	0.4847	0.07962	0.1643
43	1.0454	0.1325	0.1267	1.0939	0.4694	0.4291
44	0.9934	0.1634	0.1645	0.833	0.1725	0.207