|
| Strain ID | Hospital | MLST (n = 15) | Mobile genetic support |
| Plasmids (plasmid replicons) (n = 11) | Intact prophage (n = 18) |
|
| 1MPA1 | Central | ST40 | pTEF3 (repUS13), pAD1 (rep9), pEF47 (rep6) | Entero_phiFL1A |
| 1MPA3 | Central | ST40 | pTEF3 (repUS13), pAD1 (rep9), pEFC1 (rep6) | Entero_phiFL1A |
| 1MPD4 | Central | ST16 | — | Entero_phiFL1A, Entero_EFC_1, Lactob_PLE2 |
| 1MPF1 | Central | ST498 | pTEF3 (repUS13) | Entero_phiFL3A |
| 1MPF3 | Central | ST498 | pTEF3 (repUS13), pAD1 (rep9), pEFC1 (rep6) | Entero_phiFL3A, Entero_phiFL1A |
| 1MPJ101 | Central | ST40 | pTEF3 (repUS13), pAD1 (rep9), pEFC1 (rep6) | Entero_phiFL1A |
| 1MPK2 | Central | ST40 | pTEF3 (repUS13), pAD1 (rep9), pEFC1 (rep6) | Entero_phiFL1A |
| 1MPK3 | Central | ST40 | pTEF3 (repUS13), pAD1 (rep9), pEFC1 (rep6) | Entero_phiFL1A |
| 1MPK4 | Central | ST40 | pTEF3 (repUS13), pAD1 (rep9), pEFC1 (rep6) | Entero_phiFL1A |
| 2MPJ104 | Central | ST23 | pAD1 (rep9), pEF47 (rep6) | Entero_phiFL3A, Entero_phiFL1A |
| 3MPH1 | Central | ST610 | pTEF2 (rep9) | — |
| 3MPJ101 | Central | ST258 | pTEF2 (rep9) | Strept_9871 |
| 2UIJ104 | Tertiary | ST126 | pTEF2 (rep9), pAD1 (rep9) | Entero_phiFL1A, Lactoc_98201 |
| 2UIK2 | Tertiary | ST126 | pTEF2 (rep9), pAD1 (rep9) | Entero_phiFL1A, Lactoc_98201, Cronob_vB_CsaM |
| 2UIK3 | Tertiary | ST21 | pTEF2 (rep9) | Entero_vB_IME197, Lactoc_63301 |
| 2UPA3 | Tertiary | ST386 | pTEF3 (repUS13), pEFC1 (rep6) | Entero_phiEf11 |
| 2UPC4 | Tertiary | ST386 | pTEF3 (repUS13), pEF47 (rep6) | Entero_phiEf11 |
| 2UPF4 | Tertiary | ST314 | — | — |
| 2UPJ202 | Tertiary | ST386 | pTEF3 (repUS13), pEFC1 (rep6) | Entero_phiEf11 |
| 3UIA2 | Tertiary | ST16 | — | Entero_EF62phi, Strept_phiARI0460_1 |
| 3UIC1 | Tertiary | ST16 | pTEF2 (rep9), pCF10 (rep9) | Entero_phiEf11 |
| 3UIE2 | Tertiary | ST268 | — | Entero_phiFL1A |
| 3UIJ202 | Tertiary | ST282 | pTEF2 (rep9), pAD1 (rep9) | — |
| 3UPF3 | Tertiary | ST16 | — | Entero_EFC_1, Strept_phiARI0131_1, Strept_phiARI0460_1 |
| 3UPF4 | Tertiary | ST16 | — | Entero_phiFL1A, Entero_EFC_1, Strept_phiARI0460_1, Lactoc_PLgT_1 |
| 3UPH1 | Tertiary | ST23 | pEFC1 (rep6) | Entero_phiFL3A |
| 3UIC2 | Tertiary | ST16 | pTEF2 (rep9), pCF10 (rep9) | Entero_phiFL1A, Entero_phiEf11 |
| 1CIB1 | Regional | ST21 | pTEF2 (rep9) | Entero_vB_IME197, Lactoc_63301 |
| 1CID1 | Regional | ST21 | pTEF2 (rep9) | Entero_vB_IME197, Lactob_PLE2 |
| 1CIH3 | Regional | ST21 | pTEF2 (rep9) | Entero_vB_IME197, Lactoc_63301, Stx2_c_1717 |
| 1CPK2 | Regional | ST21 | pTEF2 (rep9) | Entero_vB_IME197, Lactob_PLE2 |
| 1CPK3 | Regional | ST126 | pTEF2 (rep9), pAD1 (rep9) | Lactoc_98201 |
| 2CPF3 | Regional | ST41 | pTEF3 (repUS13) | Entero_vB_IME197, Lactob_PLE2 |
| 2CPH2 | Regional | ST16 | — | Entero_phiFL1A |
| 3CPH1 | Regional | ST23 | — | Entero_phiFL3A, Entero_phiFL1A |
| 2SIL2 | District | ST922 | pk214 (rep7), pAD1 (rep9), pEFR (rep11) | Entero_phiFL3A, Paenib_Xenia |
| 2SPJ101 | District | ST6 | pTEF3 (repUS13), pPD1 (rep9), pRE25 (rep2), pUB110 (repUS14), pKH7 (rep7) | Entero_SANTOR1 |
| 2SPL2 | District | ST314 | pTEF2 (rep9) | Strept_9872 |
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